output
20122024
most citedThe need to implement FAIR principles in biomolecular simulations

65 citations

9 papers

q-bio.BM2024★ 65 cited

The need to implement FAIR principles in biomolecular simulations

Rommie Amaro, Johan Åqvist, Ivet Bahar +125

This letter illustrates the opinion of the molecular dynamics (MD) community on the need to adopt a new FAIR paradigm for the use of molecular simulations. It highlights the necess…

cond-mat.soft2023★ 1 cited

Tilt-induced clustering of cell adhesion proteins

Shao-Zhen Lin, Rishita Changede, Michael P. Sheetz +2

Cell adhesion proteins are transmembrane proteins that bind cells to their environment. These proteins typically cluster into disk-shaped or linear structures. Here we show that su…

cs.CY2022★ 28 cited

Systematic Design and Evaluation of Social Determinants of Health Ontology (SDoHO)

Yifang Dang, Fang Li, Xinyue Hu +11

Social determinants of health (SDoH) have a significant impact on health outcomes and well-being. Addressing SDoH is the key to reducing healthcare inequalities and transforming a…

q-bio.TO2021★ 9 cited

Mathematical Modeling, In-Human Evaluation and Analysis of Volume Kinetics and Kidney Function after Burn Injury and Resuscitation

Ghazal ArabiDarrehDor, Ali Tivay, Chris Meador +3

Existing burn resuscitation protocols exhibit large variability in treatment efficacy. Hence, they must be further optimized based on comprehensive knowledge of burn pathophysiolog…

q-bio.TO2021★ 11 cited

Mathematical Model of Volume Kinetics and Renal Function after Burn Injury and Resuscitation

Ghazal ArabiDarrehDor, Ali Tivay, Ramin Bighamian +4

This paper presents a mathematical model of blood volume kinetics and renal function in response to burn injury and resuscitation, which is applicable to the development and non-cl…

cs.CL2021★ 63 cited

Deep learning-based NLP Data Pipeline for EHR Scanned Document Information Extraction

Enshuo Hsu, Ioannis Malagaris, Yong-Fang Kuo +2

Scanned documents in electronic health records (EHR) have been a challenge for decades, and are expected to stay in the foreseeable future. Current approaches for processing often…