output
20122026
most citedAI-driven multi-omics integration for multi-scale predictive modeling of causal genotype-environment-phenotype relationships

161 citations

18 papers

cs.CL2026

The Dynamics of Human and AI-Generated Language: How Semantics Fluctuates across Different Timescales

Han-Jen Chang, Yasir Çatal, Angelika Wolman +5

Spoken language, whether produced by humans or large language models (LLM), unfolds over time with varying semantic content. However, we still lack simple, interpretable time-serie…

cs.CL2025

Distinct social-linguistic processing between humans and large audio-language models: Evidence from model-brain alignment

Hanlin Wu, Xufeng Duan, Zhenguang Cai

Voice-based AI development faces unique challenges in processing both linguistic and paralinguistic information. This study compares how large audio-language models (LALMs) and hum…

cs.AI2024★ 161 cited

AI-driven multi-omics integration for multi-scale predictive modeling of causal genotype-environment-phenotype relationships

You Wu, Lei Xie

Despite the wealth of single-cell multi-omics data, it remains challenging to predict the consequences of novel genetic and chemical perturbations in the human body. It requires kn…

cs.LG2023★ 25 cited

A Universal Framework for Accurate and Efficient Geometric Deep Learning of Molecular Systems

Shuo Zhang, Yang Liu, Lei Xie

Molecular sciences address a wide range of problems involving molecules of different types and sizes and their complexes. Recently, geometric deep learning, especially Graph Neural…

stat.ML2023★ 1 cited

DeepFDR: A Deep Learning-based False Discovery Rate Control Method for Neuroimaging Data

Taehyo Kim, Hai Shu, Qiran Jia +1

Voxel-based multiple testing is widely used in neuroimaging data analysis. Traditional false discovery rate (FDR) control methods often ignore the spatial dependence among the voxe…

q-bio.NC2023

Ordinal Characterization of Similarity Judgments

Jonathan D. Victor, Guillermo Aguilar, Suniyya A. Waraich

Characterizing judgments of similarity within a perceptual or semantic domain, and making inferences about the underlying structure of this domain from these judgments, has an incr…