output
20052024
most citedMetropolized Randomized Maximum Likelihood for sampling from multimodal distributions

33 citations

7 papers

q-bio.BM2024★ 2 cited

Multi-modal Representation Learning Enables Accurate Protein Function Prediction in Low-Data Setting

Serbülent Ünsal, Sinem Özdemir, Bünyamin Kasap +4

In this study, we propose HOPER (HOlistic ProtEin Representation), a novel multimodal learning framework designed to enhance protein function prediction (PFP) in low-data settings.…

physics.flu-dyn2018★ 32 cited

A pore-scale model for permeable biofilm: numerical simulations and laboratory experiments

David Landa-Marbán, Na Liu, Iuliu Sorin Pop +5

In this paper we derive a pore-scale model for permeable biofilm formation in a two-dimensional pore. The pore is divided in two phases: water and biofilm. The biofilm is assumed t…

math.NA2016★ 15 cited

Stochastic Galerkin Framework with Locally Reduced Bases for Nonlinear Two-Phase Transport in Heterogeneous Formations

Per Pettersson, Hamdi A. Tchelepi

The generalized polynomial chaos method is applied to the Buckley-Leverett equation. We consider a spatially homogeneous domain modeled as a random field. The problem is projected…

stat.CO2015★ 33 cited

Metropolized Randomized Maximum Likelihood for sampling from multimodal distributions

Dean S. Oliver

This article describes a method for using optimization to derive efficient independent transition functions for Markov chain Monte Carlo simulations. Our interest is in sampling fr…

nucl-th2012★ 8 cited

QGP flow fluctuations and the characteristics of higher moments

D. J. Wang, L. P. Csernai, D. Strottman +6

The dynamical development of expanding Quark-gluon Plasma (QGP) flow is studied in a 3+1D fluid dynamical model with a globally symmetric, initial condition. We minimize fluctuatio…

hep-ph2005★ 14 cited

Modified Boltzmann Transport Equation and Freeze Out

L. P. Csernai, V. K. Magas, E. Molnar +2

We study Freeze Out process in high energy heavy ion reaction. The description of the process is based on the Boltzmann Transport Equation (BTE). We point out the basic limitations…