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20112026
most citedDirect-coupling analysis of residue co-evolution captures native contacts across many protein families

1.6k citations

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6 papers · 1 filter

cond-mat.soft2025

Chirality transfer in lyotropic twist-bend nematics

Anna Ashkinazi, Hemani Chhabra, Anouar El Moumane +2

Using molecular simulations and classical density functional theory, we study the liquid-crystalline phase behaviour of a series of bent rod-like mesogens with a controlled degree…

cond-mat.soft2023★ 32 cited

Quantitative evaluation of methods to analyze motion changes in single-particle experiments

Gorka Muñoz-Gil, Harshith Bachimanchi, Jesús Pineda +33

The analysis of live-cell single-molecule imaging experiments can reveal valuable information about the heterogeneity of transport processes and interactions between cell component…

cond-mat.soft2022★ 13 cited

Soft disorder modulates the assembly path of protein complexes

Beatriz Seoane, Alessandra Carbone

The relationship between interactions, flexibility and disorder in proteins has been explored from many angles: folding upon binding, flexibility of the core relative to the periph…

cond-mat.soft2017★ 7 cited

Intermittent transport of bacterial chromosomal loci

Marco Gherardi, Ludovico Calabrese, Mikhail Tamm +1

The short-time dynamics of bacterial chromosomal loci is a mixture of subdiffusive and active motion, in the form of rapid relocations with near-ballistic dynamics. While previous…

cond-mat.soft2014

Combined collapse by bridging and self-adhesion in a prototypical polymer model inspired by the bacterial nucleoid

Vittore F. Scolari, Marco Cosentino Lagomarsino

Recent experimental results suggest that the E. coli chromosome feels a self-attracting interaction of osmotic origin, and is condensed in foci by bridging interactions. Motivated…

cond-mat.soft2011

Hydrodynamically synchronized states in active colloidal arrays

Loïc Damet, Giovanni M. Cicuta, Jurij Kotar +2

Colloidal particles moving in a fluid interact via the induced velocity field. The collective dynamic state for a class of actively forced colloids, driven by harmonic potentials v…