output
19952019
most citedThree-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin

176 citations

10 papers

q-bio.CB2019★ 5 cited

Cooperative regulation of cellular identity in systems with intercellular communication defects

Nataliya Stankevich, Aneta Koseska

The cooperative dynamics of cellular populations emerging from the underlying interactions determines cellular functions, and thereby their identity in tissues. Global deviations f…

physics.bio-ph2019★ 176 cited

Three-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin

Gabriela Nass Kovacs, Jacques-Philippe Colletier, Marie Grünbein +25

Bacteriorhodopsin (bR) is a light-driven proton pump. We use time-resolved crystallography at an X-ray free-electron laser to follow the structural changes in multiphoton-excited b…

physics.bio-ph2018★ 16 cited

Chemical event chain model of coupled genetic oscillators

David J. Jörg, Luis G. Morelli, Frank Jülicher

We introduce a stochastic model of coupled genetic oscillators in which chains of chemical events involved in gene regulation and expression are represented as sequences of Poisson…

nlin.AO2018★ 13 cited

Mobility-induced persistent chimera states

Gabriela Petrungaro, Koichiro Uriu, Luis G. Morelli

We study the dynamics of mobile, locally coupled identical oscillators in the presence of coupling delays. We find different kinds of chimera states, in which coherent in-phase and…

q-bio.MN2016★ 8 cited

Multiple binding sites for transcriptional repressors can produce regular bursting and enhance noise suppression

Iván M. Lengyel, Luis G. Morelli

Cells may control fluctuations in protein levels by means of negative autoregulation, where transcription factors bind DNA sites to repress their own production. Theoretical studie…

nlin.CD2013

Efficient hierarchical analysis of the stability of a network through dimensional reduction of its influence topology

Ali Kinkhabwala

The connection between network topology and stability remains unclear. General approaches that clarify this relationship and allow for more efficient stability analysis would be de…