output
20092026
most citedVariant interpretation using population databases: lessons from gnomAD

718 citations

Showing cs.CLShow all

12 papers · 1 filter

cs.CL2025

Evaluating Retrieval-Augmented Generation vs. Long-Context Input for Clinical Reasoning over EHRs

Skatje Myers, Dmitriy Dligach, Timothy A. Miller +6

Objective: To evaluate whether retrieval-augmented generation (RAG) can serve as an efficient alternative to long-context prompting for clinical reasoning over electronic health re…

cs.CL2025

Using tournaments to calculate AUROC for zero-shot classification with LLMs

WonJin Yoon, Ian Bulovic, Timothy A. Miller

Large language models perform surprisingly well on many zero-shot classification tasks, but are difficult to fairly compare to supervised classifiers due to the lack of a modifiabl…

cs.CL2025★ 1 cited

Aspect-Oriented Summarization for Psychiatric Short-Term Readmission Prediction

WonJin Yoon, Boyu Ren, Spencer Thomas +4

Recent progress in large language models (LLMs) has enabled the automated processing of lengthy documents even without supervised training on a task-specific dataset. Yet, their ze…

cs.CL2024★ 17 cited

Lessons Learned on Information Retrieval in Electronic Health Records: A Comparison of Embedding Models and Pooling Strategies

Skatje Myers, Timothy A. Miller, Yanjun Gao +4

Objective: Applying large language models (LLMs) to the clinical domain is challenging due to the context-heavy nature of processing medical records. Retrieval-augmented generation…

cs.CL2024★ 59 cited

From Explainable to Interpretable Deep Learning for Natural Language Processing in Healthcare: How Far from Reality?

Guangming Huang, Yingya Li, Shoaib Jameel +2

Deep learning (DL) has substantially enhanced natural language processing (NLP) in healthcare research. However, the increasing complexity of DL-based NLP necessitates transparent…

cs.CL2023★ 91 cited

Leveraging Medical Knowledge Graphs Into Large Language Models for Diagnosis Prediction: Design and Application Study

Yanjun Gao, Ruizhe Li, Emma Croxford +6

Electronic Health Records (EHRs) and routine documentation practices play a vital role in patients' daily care, providing a holistic record of health, diagnoses, and treatment. How…