161 citations
6 papers
Cohorting to isolate asymptomatic spreaders: An agent-based simulation study on the Mumbai Suburban Railway
Alok Talekar, Sharad Shriram, Nidhin Vaidhiyan +10
The Mumbai Suburban Railways, \emph{locals}, are a key transit infrastructure of the city and is crucial for resuming normal economic activity. To reduce disease transmission, poli…
A genomic characterization of metallic nanoparticles
Kevin Rossi, Gian Giacomo Asara, Francesca Baletto
With a focus on platinum nanoparticles of different sizes (diameter of 1-9 nm) and shapes, we sequence their geometrical genome by recording the relative occurrence of all the non…
Localization on Hopf surfaces
Benjamin Assel, Davide Cassani, Dario Martelli
We discuss localization of the path integral for supersymmetric gauge theories with an R-symmetry on Hermitian four-manifolds. After presenting the localization locus equations for…
SInC: An accurate and fast error-model based simulator for SNPs, Indels and CNVs coupled with a read generator for short-read sequence data
Swetansu Pattnaik, Saurabh Gupta, Arjun A Rao +1
We report SInC (SNV, Indel and CNV) simulator and read generator, an open-source tool capable of simulating biological variants taking into account a platform-specific error model.…
Augmenting transcriptome assembly combinatorially
Prachi Jain, Neeraja M. Krishnan, Binay Panda
RNA-seq allows detection and precise quantification of transcripts, provides comprehensive understanding of exon/intron boundaries, aids discovery of alternatively spliced isoforms…
Geometric representation of graphs in low dimension
L. Sunil Chandran, Mathew C Francis, Naveen Sivadasan
We give an efficient randomized algorithm to construct a box representation of any graph G on n vertices in dimensions, where is the maximum degree of G. We…