2.7k citations · 9.2k across the 86 of their papers we have counts for
9 papers · 2 filters
Biomedical image analysis competitions: The state of current participation practice
Matthias Eisenmann, Annika Reinke, Vivienn Weru +352
The number of international benchmarking competitions is steadily increasing in various fields of machine learning (ML) research and practice. So far, however, little is known abou…
Rapid and robust endoscopic content area estimation: A lean GPU-based pipeline and curated benchmark dataset
Charlie Budd, Luis C. Garcia-Peraza-Herrera, Martin Huber +2
Endoscopic content area refers to the informative area enclosed by the dark, non-informative, border regions present in most endoscopic footage. The estimation of the content area…
Can segmentation models be trained with fully synthetically generated data?
Virginia Fernandez, Walter Hugo Lopez Pinaya, Pedro Borges +4
In order to achieve good performance and generalisability, medical image segmentation models should be trained on sizeable datasets with sufficient variability. Due to ethics and g…
Driving Points Prediction For Abdominal Probabilistic Registration
Samuel Joutard, Reuben Dorent, Sebastien Ourselin +2
Inter-patient abdominal registration has various applications, from pharmakinematic studies to anatomy modeling. Yet, it remains a challenging application due to the morphological…
FastGeodis: Fast Generalised Geodesic Distance Transform
Muhammad Asad, Reuben Dorent, Tom Vercauteren
The FastGeodis package provides an efficient implementation for computing Geodesic and Euclidean distance transforms (or a mixture of both), targeting efficient utilisation of CPU…
Cross-Modality Image Registration using a Training-Time Privileged Third Modality
Qianye Yang, David Atkinson, Yunguan Fu +7
In this work, we consider the task of pairwise cross-modality image registration, which may benefit from exploiting additional images available only at training time from an additi…
Deep Quality Estimation: Creating Surrogate Models for Human Quality Ratings
Florian Kofler, Ivan Ezhov, Lucas Fidon +14
Human ratings are abstract representations of segmentation quality. To approximate human quality ratings on scarce expert data, we train surrogate quality estimation models. We eva…
blob loss: instance imbalance aware loss functions for semantic segmentation
Florian Kofler, Suprosanna Shit, Ivan Ezhov +14
Deep convolutional neural networks (CNN) have proven to be remarkably effective in semantic segmentation tasks. Most popular loss functions were introduced targeting improved volum…
Motion Correction and Volumetric Reconstruction for Fetal Functional Magnetic Resonance Imaging Data
Daniel Sobotka, Michael Ebner, Ernst Schwartz +8
Motion correction is an essential preprocessing step in functional Magnetic Resonance Imaging (fMRI) of the fetal brain with the aim to remove artifacts caused by fetal movement an…