activity
20162019
most citedChemception: A Deep Neural Network with Minimal Chemistry Knowledge Matches the Performance of Expert-developed QSAR/QSPR Models

115 citations · 331 across the 10 of their papers we have counts for

collaborators

11 papers

cs.NE2019★ 4 cited

Recombination of Artificial Neural Networks

Aaron Vose, Jacob Balma, Alex Heye +5

We propose a genetic algorithm (GA) for hyperparameter optimization of artificial neural networks which includes chromosomal crossover as well as a decoupling of parameters (i.e.,…

cs.LG2018★ 14 cited

Multimodal Deep Neural Networks using Both Engineered and Learned Representations for Biodegradability Prediction

Garrett B. Goh, Khushmeen Sakloth, Charles Siegel +2

Deep learning algorithms excel at extracting patterns from raw data, and with large datasets, they have been very successful in computer vision and natural language applications. H…

cs.AI2018★ 14 cited

ColdRoute: Effective Routing of Cold Questions in Stack Exchange Sites

Jiankai Sun, Abhinav Vishnu, Aniket Chakrabarti +2

Routing questions in Community Question Answer services (CQAs) such as Stack Exchange sites is a well-studied problem. Yet, cold-start -- a phenomena observed when a new question i…

cs.DC2018★ 79 cited

GossipGraD: Scalable Deep Learning using Gossip Communication based Asynchronous Gradient Descent

Jeff Daily, Abhinav Vishnu, Charles Siegel +2

In this paper, we present GossipGraD - a gossip communication protocol based Stochastic Gradient Descent (SGD) algorithm for scaling Deep Learning (DL) algorithms on large-scale sy…

stat.ML2017★ 5 cited

Using Rule-Based Labels for Weak Supervised Learning: A ChemNet for Transferable Chemical Property Prediction

Garrett B. Goh, Charles Siegel, Abhinav Vishnu +1

With access to large datasets, deep neural networks (DNN) have achieved human-level accuracy in image and speech recognition tasks. However, in chemistry, data is inherently small…

stat.ML2017★ 62 cited

SMILES2Vec: An Interpretable General-Purpose Deep Neural Network for Predicting Chemical Properties

Garrett B. Goh, Nathan O. Hodas, Charles Siegel +1

Chemical databases store information in text representations, and the SMILES format is a universal standard used in many cheminformatics software. Encoded in each SMILES string is…

stat.ML2017

How Much Chemistry Does a Deep Neural Network Need to Know to Make Accurate Predictions?

Garrett B. Goh, Charles Siegel, Abhinav Vishnu +2

The meteoric rise of deep learning models in computer vision research, having achieved human-level accuracy in image recognition tasks is firm evidence of the impact of representat…

cs.DC2017★ 1 cited

What does fault tolerant Deep Learning need from MPI?

Vinay Amatya, Abhinav Vishnu, Charles Siegel +1

Deep Learning (DL) algorithms have become the de facto Machine Learning (ML) algorithm for large scale data analysis. DL algorithms are computationally expensive - even distributed…

stat.ML2017★ 115 cited

Chemception: A Deep Neural Network with Minimal Chemistry Knowledge Matches the Performance of Expert-developed QSAR/QSPR Models

Garrett B. Goh, Charles Siegel, Abhinav Vishnu +2

In the last few years, we have seen the transformative impact of deep learning in many applications, particularly in speech recognition and computer vision. Inspired by Google's In…

cs.DC2017★ 3 cited

User-transparent Distributed TensorFlow

Abhinav Vishnu, Joseph Manzano, Charles Siegel +1

Deep Learning (DL) algorithms have become the {\em de facto} choice for data analysis. Several DL implementations -- primarily limited to a single compute node -- such as Caffe, Te…

cs.DC2016★ 34 cited

Distributed TensorFlow with MPI

Abhinav Vishnu, Charles Siegel, Jeffrey Daily

Machine Learning and Data Mining (MLDM) algorithms are becoming increasingly important in analyzing large volume of data generated by simulations, experiments and mobile devices. W…