4 papers
MARS: Processing-In-Memory Acceleration of Raw Signal Genome Analysis Inside the Storage Subsystem
Melina Soysal, Konstantina Koliogeorgi, Can Firtina +8
Raw signal genome analysis (RSGA) has emerged as a promising approach to enable real-time genome analysis by directly analyzing raw electrical signals. However, rapid advancements…
Proteus: Enabling High-Performance Processing-Using-DRAM with Dynamic Bit-Precision, Adaptive Data Representation, and Flexible Arithmetic
Geraldo F. Oliveira, Mayank Kabra, Yuxin Guo +8
Processing-using-DRAM (PUD) is a paradigm where the analog operational properties of DRAM are used to perform bulk logic operations. While PUD promises high throughput at low energ…
RawHash2: Mapping Raw Nanopore Signals Using Hash-Based Seeding and Adaptive Quantization
Can Firtina, Melina Soysal, Joël Lindegger +1
Summary: Raw nanopore signals can be analyzed while they are being generated, a process known as real-time analysis. Real-time analysis of raw signals is essential to utilize the u…
Simultaneous Many-Row Activation in Off-the-Shelf DRAM Chips: Experimental Characterization and Analysis
Ismail Emir Yuksel, Yahya Can Tugrul, F. Nisa Bostanci +8
We experimentally analyze the computational capability of commercial off-the-shelf (COTS) DRAM chips and the robustness of these capabilities under various timing delays between DR…