activity
20162026
most citedUnexpected entanglement dynamics in semidilute blends of supercoiled and ring DNA

36 citations · 221 across the 27 of their papers we have counts for

collaborators

29 papers

cond-mat.soft2026

Spatiotemporally-resolved differential dynamic microscopy reveals strain-induced deformations in heterogeneous soft materials

Aysan Razzaghi, Mehrzad Sasanpour, Jasmine Ren +5

Understanding the microscopic behavior of materials in response to mechanical perturbations is a central challenge in soft matter, yet existing methods, which typically rely on mic…

cond-mat.soft2026

Pinned Boundaries Delay Contraction and Shape Stress Relaxation in Active Gels

Aniket Marne, James Clarke, Aravind Rao +6

Cells dynamically generate, transmit, and dissipate stress. Central to these processes is the actomyosin cortex, an active contractile material that drives cellular mechanical beha…

cond-mat.soft2026

Starch granules are instructive scaffolds for synergistic reinforcement and dissipation in hydrogel composites

Shirlaine Juliano, Jasmine Samaniego, Ian M Lillie +3

A fundamental challenge in soft material design is the competition between rigidity and dynamicity, as stiffening mechanisms typically suppress energy dissipation. Here, we demonst…

cond-mat.soft2025

BARCODE: Biomaterial Activity Readouts to Categorize, Optimize, Design and Engineer for high throughput screening and characterization of dynamically restructuring soft materials

Qiaopeng Chen, Aditya Sriram, Ayan Das +8

Active, responsive, nonequilibrium materials, at the forefront of materials engineering, offer dynamical restructuring, mobility and other complex life-like properties. Yet, this e…

physics.bio-ph2025

Active and passive crosslinking of cytoskeleton scaffolds tune the effects of cell inclusions on composite structure

Katarina Matic, Nimisha Krishnan, Eric Frank +7

Incorporating cells within active biomaterial scaffolds is a promising strategy to develop forefront materials that can autonomously sense, respond, and alter the scaffold in respo…

cond-mat.soft2025

Kinesin-driven de-mixing of cytoskeleton composites drives emergent mechanical properties

Janet Sheung, Christopher Gunter, Katarina Matic +5

The cytoskeleton is an active composite of filamentous proteins that dictates diverse mechanical properties and processes in eukaryotic cells by generating forces and autonomously…

cond-mat.soft2024

DNA transport is topologically sculpted by active microtubule dynamics

Dylan P. McCuskey, Raisa E. Achiriloaie, Claire Benjamin +6

The transport of macromolecules, such as DNA, through the cytoskeleton is critical to wide-ranging cellular processes from cytoplasmic streaming to transcription. The rigidity and…

cond-mat.soft2023

Cooperative rheological state-switching of enzymatically-driven composites of circular DNA and dextran

Juexin Marfai, Ryan J. McGorty, Rae M. Robertson-Anderson

Polymer topology, which plays a principal role in the rheology of polymeric fluids, and non-equilibrium materials, which exhibit time-varying rheological properties, are topics of…

cond-mat.soft2023

Timed material self-assembly controlled by circadian clock proteins

Gregor Leech, Lauren Melcher, Michelle Chiu +10

Active biological molecules present a powerful, yet largely untapped, opportunity to impart autonomous regulation to materials. Because these systems can function robustly to regul…

cond-mat.soft2022★ 12 cited

Polymer threadings and rigidity dictate the viscoelasticity and nonlinear relaxation dynamics of entangled ring-linear blends and their composites with rigid rod microtubules

Karthik R. Peddireddy, Ryan Clairmont, Rae M. Robertson-Anderson

Mixtures of polymers of varying topologies and stiffnesses display complex emergent rheological properties that often cannot be predicted from their single-component counterparts.…

cond-mat.soft2022★ 1 cited

Motor-driven advection competes with crowding to drive spatiotemporally heterogeneous transport in cytoskeleton composites

Janet Y Sheung, Jonathan Garamella, Stella K Kahl +3

The cytoskeleton -- a composite network of biopolymers, molecular motors, and associated binding proteins -- is a paradigmatic example of active matter. Particle transport through…

cond-mat.soft2022★ 23 cited

OpTiDDM (Optical Tweezers integrating Differential Dynamic Microscopy) maps the spatiotemporal propagation of nonlinear stresses in polymer blends and composites

Karthik R. Peddireddy, Ryan Clairmont, Philip Neill +2

How local stresses propagate through polymeric fluids, and, more generally, how macromolecular dynamics give rise to viscoelasticity are open questions vital to wide-ranging scient…

math.AG2021

Monge-Ampère functionals for the curvature tensor of a holomorphic vector bundle

Jean-Pierre Demailly

Let be a holomorphic vector bundle on a projective manifold such that is ample. We introduce three functionals related to Griffiths, Nakano and dual Nakano p…

physics.bio-ph2021

Motor antagonism dictates emergent dynamics in active double networks tuned by crosslinkers

Ryan J. McGorty, Christopher J. Currie, Jonathan Michel +8

The cytoskeleton relies on diverse populations of motors, filaments, and binding proteins acting in concert to enable non-equilibrium processes ranging from mitosis to chemotaxis.…

cond-mat.soft2021

Sustained Order-Disorder Transitions in a Model Colloidal System Driven by Rhythmic Crosslinking

Lauren Melcher, Elisabeth Rennert, Jennifer Ross +3

Biological systems have the unique ability to self-organize and generate autonomous motion and work. Motivated by this, we investigate a 2D model colloidal network that can repeate…

cond-mat.soft2021

Topological digestion drives time-varying rheology of entangled DNA fluids

Davide Michieletto, Philip Neill, Simon Weir +4

Understanding and controlling the rheology of polymeric complex fluids that are pushed out-of-equilibrium is a fundamental problem in both industry and biology. For example, to pac…

cond-mat.soft2021

DNA topology dictates strength and flocculation in DNA-microtubule composites

Karthik R. Peddireddy, Davide Michieletto, Gina Aguirre +3

Polymer composites are ubiquitous in biology and industry alike, owing to their emergent desirable mechanical properties not attainable in single-species systems. At the same time,…

cond-mat.soft2021★ 23 cited

Active restructuring of cytoskeleton composites leads to increased mechanical stiffness, memory, and heterogeneity

Janet Y. Sheung, Daisy H. Achiriloaie, Karthik Peddireddy +5

The composite cytoskeleton, comprising interacting networks of semiflexible actin and rigid microtubules, actively generates forces and restructures using motor proteins such as my…

cond-mat.soft2021

Active Cytoskeletal Composites Display Emergent Tunable Contractility and Restructuring

Gloria Lee, Gregor Leech, Pancy Lwin +7

The cytoskeleton is a model active matter system that controls diverse cellular processes from division to motility. While both active actomyosin dynamics and actin-microtubule int…

cond-mat.soft2021★ 28 cited

Dynamics and Rheology of Ring-Linear Blend Semidilute Solutions in Extensional Flow: Single Molecule Experiments

Yuecheng Zhou, Charles D. Young, Kathryn E. Regan +7

Ring polymers exhibit unique flow properties due to their closed chain topology. Despite recent progress, we have not yet achieved a full understanding of the nonequilibrium flow b…

cond-mat.soft2020★ 31 cited

Viscoelastic properties of ring-linear DNA blends exhibit non-monotonic dependence on blend composition

K. R. Peddireddy, M. Lee, C. M. Schroeder +1

Entangled ring polymers, along with blends of ring and linear polymers, continue to be a topic of great interest and debate due to the conflicting experimental results in the liter…

cond-mat.soft2019

Topology-dependent anomalous dynamics of ring and linear DNA are sensitive to cytoskeleton crosslinking

Devynn M. Wulstein, Kathryn E. Regan, Jonathan Garamella +2

Cytoskeletal crowding plays a key role in the diffusion of DNA molecules through the cell, acting as a barrier to effective intracellular transport and conformational stability req…

cond-mat.soft2019★ 36 cited

Unexpected entanglement dynamics in semidilute blends of supercoiled and ring DNA

Karthik R. Peddireddy, Megan Lee, Yuecheng Zhou +4

Blends of polymers of different topologies, such as ring and supercoiled, naturally occur in biology and often exhibit emergent viscoelastic properties coveted in industry. However…

cond-mat.soft2019

Maximally Stiffening Composites Require Maximally Coupled Rather Than Maximally Entangled Polymer Species

Davide Michieletto, Robert Fitzpatrick, Rae M Robertson-Anderson

Polymer composites are ideal candidates for next generation biomimetic soft materials because of their exquisite bottom-up designability. However, the richness of behaviours comes…