activity
20122018
most citedFragIt: A Tool to Prepare Input Files for Fragment Based Quantum Chemical Calculations

53 citations · 294 across the 16 of their papers we have counts for

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Showing 2013Show all

5 papers · 1 filter

physics.chem-ph2013★ 8 cited

A computational method for the systematic screening of reaction barriers in enzymes: Searching for Bacillus circulans xylanase mutants with greater activity towards a synthetic substrate

Martin R. Hediger, Casper Steinmann, Luca De Vico +1

We present a semi-empirical (PM6-based) computational method for systematically estimating the effect of all possible single mutants, within a certain radius of the active site, on…

physics.chem-ph2013★ 34 cited

Protein structure validation and refinement using amide proton chemical shifts derived from quantum mechanics

Anders S. Christensen, Troels E. Linnet, Mikael Borg +4

We present the ProCS method for the rapid and accurate prediction of protein backbone amide proton chemical shifts - sensitive probes of the geometry of key hydrogen bonds that det…

physics.chem-ph2013★ 12 cited

Hybrid RHF/MP2 geometry optimizations with the Effective Fragment Molecular Orbital Method

Anders S. Christensen, Casper Steinmann, Dmitri G. Fedorov +1

The frozen domain effective fragment molecular orbital method is extended to allow for the treatment of a single fragment at the MP2 level of theory. The approach is applied to the…

physics.chem-ph2013★ 26 cited

Interface of the polarizable continuum model of solvation with semi-empirical methods in the GAMESS program

Casper Steinmann, Kristoffer L. Blædel, Anders S. Christensen +1

An interface between semi-empirical methods and the polarized continuum model (PCM) of solvation successfully implemented into GAMESS following the approach by Chudinov et al (Chem…

physics.chem-ph2013

The Molecule Calculator: A web-server for fast quantum mechanics-based estimation of molecular properties

Jan H. Jensen, Jimmy C. Kromann

A new web-server called The Molecule Calculator (MolCalc) is presented. The entry page is a molecular editor (JSmol) for interactive molecule building. The resulting structure can…