12 citations · 12 across the 1 of their papers we have counts for
5 papers
Inverse Design of Non-Equilibrium Steady-States: A Large Deviation Approach
William D. Piñeros, Tsvi Tlusty
The design of small scale non-equilibrium steady states (NESS) is a challenging, open ended question. While similar equilibrium problems are tractable using standard thermodynamics…
Kinetic Proofreading and the Limits of Thermodynamic Uncertainty
William D. Piñeros, Tsvi Tlusty
To mitigate errors induced by the cell's heterogeneous noisy environment, its main information channels and production networks utilize the kinetic proofreading (KPR) mechanism. He…
Unsupervised machine learning for detection of phase transitions in off-lattice systems II. Applications
R. B. Jadrich, B. A. Lindquist, W. D. Pineros +2
We outline how principal component analysis (PCA) can be applied to particle configuration data to detect a variety of phase transitions in off-lattice systems, both in and out of…
Inverse Design of Multicomponent Assemblies
William D. Piñeros, Beth A. Lindquist, Ryan B. Jadrich +1
Inverse design can be a useful strategy for discovering interactions that drive particles to spontaneously self-assemble into a desired structure. Here, we extend an inverse design…
Design of two-dimensional particle assemblies using isotropic pair interactions with an attractive well
William D. Piñeros, Ryan B. Jadrich, Thomas M. Truskett
Using ground-state and relative-entropy based inverse design strategies, isotropic interactions with an attractive well are determined to stabilize and promote as- sembly of partic…