3 papers
cs.CL2025
Evaluation of Coding Schemes for Transformer-based Gene Sequence Modeling
Chenlei Gong, Yuanhe Tian, Lei Mao +1
Currently, many studies view DNA sequences as a special type of language and utilize Transformers to model them. These studies use fixed-length k-mer segmentation and BPE subword t…
cs.CV2025
Recurrent Visual Feature Extraction and Stereo Attentions for CT Report Generation
Yuanhe Tian, Lei Mao, Yan Song
Generating reports for computed tomography (CT) images is a challenging task, while similar to existing studies for medical image report generation, yet has its unique characterist…
cs.LG2025
DNAZEN: Enhanced Gene Sequence Representations via Mixed Granularities of Coding Units
Lei Mao, Yuanhe Tian, Yan Song
Genome modeling conventionally treats gene sequence as a language, reflecting its structured motifs and long-range dependencies analogous to linguistic units and organization princ…