5 citations · 12 across the 13 of their papers we have counts for
7 papers · 1 filter
Microbiome Intervention Analysis with Transfer Functions and Mirror Statistics
Kris Sankaran, Pratheepa Jeganathan
Microbiome interventions provide valuable data about microbial ecosystem structure and dynamics. Despite their ubiquity in microbiome research, few rigorous data analysis approache…
Interactive Visualization of Spatial Omics Neighborhoods
Tinghui Xu, Kris Sankaran
Dimensionality reduction of spatial omic data can reveal shared, spatially structured patterns of expression across a collection of genomic features. We study strategies for discov…
Multiscale Analysis of Count Data through Topic Alignment
Julia Fukuyama, Kris Sankaran, Laura Symul
Topic modeling is a popular method used to describe biological count data. With topic models, the user must specify the number of topics . Since there is no definitive way to ch…
Inference of Dynamic Regimes in the Microbiome
Kris Sankaran, Susan P. Holmes
Many studies have been performed to characterize the dynamics and stability of the microbiome across a range of environmental contexts [Costello et al., 2012, Faust et al., 2015].…
Applying Machine Learning Methods to Enhance the Distribution of Social Services in Mexico
Kris Sankaran, Diego Garcia-Olano, Mobin Javed +7
The Government of Mexico's social development agency, SEDESOL, is responsible for the administration of social services and has the mission of lifting Mexican families out of pover…
Latent Variable Modeling for the Microbiome
Kris Sankaran, Susan P. Holmes
The human microbiome is a complex ecological system, and describing its structure and function under different environmental conditions is important from both basic scientific and…
Opioid Atlas: Mapping Access to Pain Medication
Kris Sankaran, Suzanne Tamang, Ami Bhatt
Opiates are some of the most effective pain relief medications available for patients suffering from cancer and surgery-related pain. Despite the affordability and effectiveness of…