1.5k citations · 6.9k across the 102 of their papers we have counts for
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Current and future directions in network biology
Marinka Zitnik, Michelle M. Li, Aydin Wells +34
Network biology is an interdisciplinary field bridging computational and biological sciences that has proved pivotal in advancing the understanding of cellular functions and diseas…
SkipGNN: Predicting Molecular Interactions with Skip-Graph Networks
Kexin Huang, Cao Xiao, Lucas Glass +2
Molecular interaction networks are powerful resources for the discovery. They are increasingly used with machine learning methods to predict biologically meaningful interactions. W…
Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19
Deisy Morselli Gysi, Ítalo Do Valle, Marinka Zitnik +8
The current pandemic has highlighted the need for methodologies that can quickly and reliably prioritize clinically approved compounds for their potential effectiveness for SARS-Co…
Network Enhancement: a general method to denoise weighted biological networks
Bo Wang, Armin Pourshafeie, Marinka Zitnik +4
Networks are ubiquitous in biology where they encode connectivity patterns at all scales of organization, from molecular to the biome. However, biological networks are noisy due to…
Large-scale analysis of disease pathways in the human interactome
Monica Agrawal, Marinka Zitnik, Jure Leskovec
Discovering disease pathways, which can be defined as sets of proteins associated with a given disease, is an important problem that has the potential to provide clinically actiona…