activity
20132023
most citedCausal Network Models of SARS-CoV-2 Expression and Aging to Identify Candidates for Drug Repurposing

69 citations · 132 across the 7 of their papers we have counts for

collaborators

7 papers

cond-mat.soft2023

Yielding behaviour of active particles in bulk and in confinement

Yagyik Goswami, G. V. Shivashankar, Srikanth Sastry

The investigation of collective behaviour in dense assemblies of self-propelled active particles has been motivated by a wide range of biological phenomena. Of particular interest…

physics.bio-ph2023

Chromatin remodeling due to transient-link-and-pass activity enhances subnuclear dynamics

Rakesh Das, Takahiro Sakaue, G. V. Shivashankar +2

Spatiotemporal coordination of chromatin and subnuclear compartments is crucial for cells. Numerous enzymes act inside nucleus\textemdash some of those transiently link and pass tw…

q-bio.MN2020★ 69 cited

Causal Network Models of SARS-CoV-2 Expression and Aging to Identify Candidates for Drug Repurposing

Anastasiya Belyaeva, Louis Cammarata, Adityanarayanan Radhakrishnan +4

Given the severity of the SARS-CoV-2 pandemic, a major challenge is to rapidly repurpose existing approved drugs for clinical interventions. While a number of data-driven and exper…

q-bio.CB2017

Active nano-mechanical stimulation of single cells for mechanobiology

M. Monticelli, D. S. Jokhun, D. Petti +2

In-vivo, cells are frequently exposed to multiple mechanical stimuli arising from the extracellular microenvironment, with deep impact on many biological functions. On the other ha…

physics.bio-ph2017★ 9 cited

Soft inclusion in a confined fluctuating active gel

Amit Singh Vishen, Jean-Francois Rupprecht, G. V. Shivashankar +2

We study stochastic dynamics of a point and extended inclusion within a one dimensional confined active viscoelastic gel. We show that the dynamics of a point inclusion can be desc…

physics.bio-ph2017★ 14 cited

Maximal fluctuations of confined actomyosin gels: dynamics of the cell nucleus

Jean-Francois Rupprecht, Amit Singh Vishen, G. V. Shivashankar +2

We investigate the effect of stress fluctuations on the stochastic dynamics of an inclusion embedded in a viscous gel. We show that, in non-equilibrium systems, stress fluctuations…

physics.bio-ph2013★ 40 cited

Actomyosin contractility rotates the cell nucleus

Abhishek Kumar, Ananyo Maitra, Madhuresh Sumit +2

The nucleus of the eukaryotic cell functions amidst active cytoskeletal filaments, but its response to the stresses carried by these filaments is largely unexplored. We report here…