3 papers
cs.CL2025
Advancing biomolecular understanding and design following human instructions
Xiang Zhuang, Keyan Ding, Tianwen Lyu +9
Understanding and designing biomolecules, such as proteins and small molecules, is central to advancing drug discovery, synthetic biology and enzyme engineering. Recent breakthroug…
cs.AI2025
Enhancing Safe and Controllable Protein Generation via Knowledge Preference Optimization
Yuhao Wang, Keyan Ding, Kehua Feng +5
Protein language models have emerged as powerful tools for sequence generation, offering substantial advantages in functional optimization and denovo design. However, these models…
cs.CL2025
Boosting LLM's Molecular Structure Elucidation with Knowledge Enhanced Tree Search Reasoning
Xiang Zhuang, Bin Wu, Jiyu Cui +6
Molecular structure elucidation involves deducing a molecule's structure from various types of spectral data, which is crucial in chemical experimental analysis. While large langua…