2 papers
q-bio.BM2025
Implicitly and Differentiably Representing Protein Surfaces and Interfaces
Cory B. Scott, Charlie Rothschild, Benjamin Nye
We introduce a pipeline for representing a protein, or protein complex, as the union of signed distance functions (SDFs) by representing each atom as a sphere with the appropriate…
cs.CV2025
Graph Lineages and Skeletal Graph Products
Eric Mjolsness, Cory B. Scott
Graphs, and sequences of growing graphs, can be used to specify the architecture of mathematical models in many fields including machine learning and computational science. Here we…