2 papers
q-bio.QM2018
Spatial Stochastic Modeling with MCell and CellBlender
Sanjana Gupta, Jacob Czech, Robert Kuczewski +4
This chapter provides a brief introduction to the theory and practice of spatial stochastic simulations. It begins with an overview of different methods available for biochemical s…
q-bio.QM2018
Evaluation of Parallel Tempering to Accelerate Bayesian Parameter Estimation in Systems Biology
Sanjana Gupta, Liam Hainsworth, Justin S. Hogg +2
Models of biological systems often have many unknown parameters that must be determined in order for model behavior to match experimental observations. Commonly-used methods for pa…