activity
20022018
most citediMapD: intrinsic Map Dynamics exploration for uncharted effective free energy landscapes

128 citations · 603 across the 20 of their papers we have counts for

collaborators

21 papers

math.DS2018★ 46 cited

Manifold learning for parameter reduction

Alexander Holiday, Mahdi Kooshkbaghi, Juan M. Bello-Rivas +3

Large scale dynamical systems (e.g. many nonlinear coupled differential equations) can often be summarized in terms of only a few state variables (a few equations), a trait that re…

nlin.CD2017

Coarse-Grained Descriptions of Dynamics for Networks with both Intrinsic and Structural Heterogeneities

Tom Bertalan, Yan Wu, Carlo Laing +2

Finding accurate reduced descriptions for large, complex, dynamically evolving networks is a crucial enabler to their simulation, analysis, and, ultimately, design. Here we propose…

physics.chem-ph2016★ 128 cited

iMapD: intrinsic Map Dynamics exploration for uncharted effective free energy landscapes

Eliodoro Chiavazzo, Ronald R. Coifman, Roberto Covino +4

We describe and implement iMapD, a computer-assisted approach for accelerating the exploration of uncharted effective Free Energy Surfaces (FES), and more generally for the extract…

math.DS2015★ 8 cited

Data-Driven Reduction for Multiscale Stochastic Dynamical Systems

Carmeline J. Dsilva, Ronen Talmon, C. William Gear +2

Multiple time scale stochastic dynamical systems are ubiquitous in science and engineering, and the reduction of such systems and their models to only their slow components is ofte…

math.NA2014

On the acceleration of spatially distributed agent-based computations: a patch dynamics scheme

Ping Liu, Giovanni Samaey, C. William Gear +1

In recent years, individual-based/agent-based modeling has been applied to study a wide range of applications, ranging from engineering problems to phenomena in sociology, economic…

math.DS2013★ 56 cited

Reduced models in chemical kinetics via nonlinear data-mining

Eliodoro Chiavazzo, C. William Gear, Carmeline J. Dsilva +2

The adoption of detailed mechanisms for chemical kinetics often poses two types of severe challenges: First, the number of degrees of freedom is large; and second, the dynamics is…