3 papers
q-bio.MN2025
A novel model class for bowtie biological networks with universal classification properties
Charles A. Johnson, Keon Ho, Park +1
Cell sensory transcription networks are the intracellular computation structure that regulates and drives cellular activity. Activity in these networks determines the the cell's ab…
math.DS2019
Steady state programming of controlled nonlinear systems via deep dynamic mode decomposition
Aqib Hasnain, Nibodh Boddupalli, Shara Balakrishnan +1
This paper describes the optimal selection of a control policy to program the steady state of controlled nonlinear systems with hyperbolic fixed points. This work is motivated by t…
math.DS2019
Koopman Operators for Generalized Persistence of Excitation Conditions for Nonlinear Systems
Nibodh Boddupalli, Aqib Hasnain, Sai Pushpak Nandanoori +1
It is hard to identify nonlinear biological models strictly from data, with results that are often sensitive to experimental conditions. Automated experimental workflows and liquid…