3 papers
q-bio.BM2025
Boltzina: Efficient and Accurate Virtual Screening via Docking-Guided Binding Prediction with Boltz-2
Kairi Furui, Masahito Ohue
In structure-based drug discovery, virtual screening using conventional molecular docking methods can be performed rapidly but suffers from limitations in prediction accuracy. Rece…
q-bio.BM2024
NPGPT: Natural Product-Like Compound Generation with GPT-based Chemical Language Models
Koh Sakano, Kairi Furui, Masahito Ohue
Natural products are substances produced by organisms in nature and often possess biological activity and structural diversity. Drug development based on natural products has been…
q-bio.BM2024
Active learning for energy-based antibody optimization and enhanced screening
Kairi Furui, Masahito Ohue
Accurate prediction and optimization of protein-protein binding affinity is crucial for therapeutic antibody development. Although machine learning-based prediction methods …