3 papers
q-bio.OT2025
Improving Biomedical Knowledge Graph Quality: A Community Approach
Katherina G Cortes, Shilpa Sundar, Sarah Gehrke +13
Biomedical knowledge graphs (KGs) are widely used across research and translational settings, yet their design decisions and implementation are often opaque. Unlike ontologies that…
cs.AI2025
Chemical classification program synthesis using generative artificial intelligence
Christopher J. Mungall, Adnan Malik, Daniel R. Korn +4
Accurately classifying chemical structures is essential for cheminformatics and bioinformatics, including tasks such as identifying bioactive compounds of interest, screening molec…
q-bio.OT2025
The Vertebrate Breed Ontology: Towards Effective Breed Data Standardization
Kathleen R. Mullen, Imke Tammen, Nicolas A. Matentzoglu +13
Background: Limited universally-adopted data standards in veterinary medicine hinder data interoperability and therefore integration and comparison; this ultimately impedes the app…