137 citations · 735 across the 29 of their papers we have counts for
9 papers · 1 filter
Modeling the effect of ion-induced shock waves and DNA breakage with the reactive CHARMM force field
Ida Friis, Alexey V. Verkhovtsev, Ilia A. Solov'yov +1
Ion-induced DNA damage is an important effect underlying ion-beam cancer therapy. This paper introduces the methodology of modeling DNA damage induced by a shock wave caused by a p…
Lethal DNA damages caused by ion-induced shock waves in cells
Ida Friis, Alexey V. Verkhovtsev, Ilia A. Solov'yov +1
The elucidation of fundamental mechanisms underlying ion-induced radiation damage of biological systems is crucial for the advancement of radiotherapy with ion beams and for radiat…
Mechanism of magnetic field effect in cryptochrome
Ilia A. Solov'yov, Klaus Schulten
Creatures as varied as mammals, fish, insects, reptiles, and migratory birds have an intriguing `sixth' sense that allows them to distinguish north from south by using the Earth's…
Alpha helix-coil phase transition: analysis of ab initio theory predictions
Ilia A. Solov'yov, Alexander V. Yakubovich, Andrey V. Solov'yov +1
In the present paper we present results of calculations obtained with the use of the theoretical method described in our preceding paper [1] and perform detail analysis of alpha he…
Ab initio theory of helix-coil phase transition
Alexander V. Yakubovich, Ilia A. Solov'yov, Andrey V. Solov'yov +1
In this paper we suggest a theoretical method based on the statistical mechanics for treating the alpha-helix-random coil transition in alanine polypeptides. We consider this proce…
Towards understanding of birds magnetoreceptor mechanism
Ilia A. Solov'yov, Walter Greiner
In the present letter we suggest a new theoretical model for a quantitative description of the magnetoreception mechanism in birds. The considered mechanism involves two types of i…
Two center multipole expansion method: application to macromolecular systems
Ilia A. Solov'yov, Alexander V. Yakubovich, Andrey V. Solov'yov +1
We propose a new theoretical method for the calculation of the interaction energy between macromolecular systems at large distances. The method provides a linear scaling of the com…
Ab initio study of alanine polypeptide chains twisting
Ilia A. Solov'yov, Alexander V. Yakubovitch, Andrey V. Solov'yov +1
We have investigated the potential energy surfaces for alanine chains consisting of three and six amino acids. For these molecules we have calculated potential energy surfaces as a…
Conformational changes in glycine tri- and hexapeptide
Alexander V. Yakubovitch, Ilia A. Solov'yov, Andrey V. Solov'yov +1
We have investigated the potential energy surfaces for glycine chains consisting of three and six amino acids. For these molecules we have calculated potential energy surfaces as a…