208 citations · 1.3k across the 42 of their papers we have counts for
44 papers
Numerical error analysis of EMC3-EIRENE simulations in the HSX stellarator
F. A. Chavarria, D. Boeyaert, H. Frerichs +2
Plasma edge simulations with codes like EMC3-EIRENE are widely used to study fusion magnetic confinement devices. However, numerical errors can significantly impact the simulation…
The beamformed trigger of RNO-G: its design and in-field performance
G Collaboration, S. Agarwal, J. A. Aguilar +76
The Radio Neutrino Observatory in Greenland (RNO-G) is a neutrino detector under construction at Summit Station, with 8 out of a planned 35 stations currently deployed. We have des…
MERLIN-SUITE: Probabilistic modular GRN inference from multi-omics data integrating regulatory priors and transcription factor activity
Suvojit Hazra, Marina Kotvanova, Kirstan Gimse +1
Accurately reconstructing gene regulatory networks (GRNs) is essential for understanding transcriptional processes in development and disease. MERLIN-SUITE (https://github.com/Roy-…
scMTNI: Leveraging cellular trajectory and context to infer dynamic GRNs from single-cell multi-omics data
Suvojit Hazra, Chandrani Kumari, Sushmita Roy
Transcriptional gene regulatory networks (GRNs) depict the directed relationships between regulators and target genes, determining gene expression patterns in a cell-type-specific…
Local probing of superconductivity at oxide interfaces with atomic force microscopy
Dilek Yildiz, Sungmin Kim, Dengyu Yang +10
Superconductivity in strontium titanate has remained enigmatic for more than 50 years. The LaAlO/SrTiO (LAO/STO) heterointerface enables systematic dimensional confinement,…
Modeling Dynamics, Cell Type Specificity, and Perturbations in Gene Regulatory Networks
Junha Shin, Spencer Halberg-Spencer, Yuda Liu +3
Gene regulatory networks (GRNs) define the regulatory relationships among molecules such as transcription factors, chromatin remodelers, and target genes. GRNs play a critical role…