5 papers
Knowledge-Guided Biomarker Identification for Label-Free Single-Cell RNA-Seq Data: A Reinforcement Learning Perspective
Meng Xiao, Weiliang Zhang, Xiaohan Huang +4
Gene panel selection aims to identify the most informative genomic biomarkers in label-free genomic datasets. Traditional approaches, which rely on domain expertise, embedded machi…
Soft Graph Clustering for single-cell RNA Sequencing Data
Ping Xu, Pengfei Wang, Zhiyuan Ning +3
Clustering analysis is fundamental in single-cell RNA sequencing (scRNA-seq) data analysis for elucidating cellular heterogeneity and diversity. Recent graph-based scRNA-seq cluste…
Collaborative Multi-Agent Reinforcement Learning for Automated Feature Transformation with Graph-Driven Path Optimization
Xiaohan Huang, Dongjie Wang, Zhiyuan Ning +7
Feature transformation methods aim to find an optimal mathematical feature-feature crossing process that generates high-value features and improves the performance of downstream ma…
FastFT: Accelerating Reinforced Feature Transformation via Advanced Exploration Strategies
Tianqi He, Xiaohan Huang, Yi Du +6
Feature Transformation is crucial for classic machine learning that aims to generate feature combinations to enhance the performance of downstream tasks from a data-centric perspec…
GeneSUM: Large Language Model-based Gene Summary Extraction
Zhijian Chen, Chuan Hu, Min Wu +4
Emerging topics in biomedical research are continuously expanding, providing a wealth of information about genes and their function. This rapid proliferation of knowledge presents…