5 papers
Another look at predicting molecular breast cancer subtypes from the METABRIC data
Isabella Lazarov, Robert Tibshirani
Classifying patients into different clusters based on genomic data can offer valuable insights into their projected disease-specific survival trajectories over time. Here we apply…
MMBU: A Massive Multi-modal Biomedical Understanding Benchmark to Probe the Perception Capabilities of Vision-Language Models
Ryan D'Cunha, Alejandro Lozano, Xiaoxiao Sun +17
Vision and language models (VLMs) hold immense promise to transform biomedical imaging workflows, from detecting lesions in chest X-rays to profiling cellular features in microscop…
No Tokens Wasted: Leveraging Long Context in Biomedical Vision-Language Models
Min Woo Sun, Alejandro Lozano, Javier Gamazo Tejero +8
Embedding vision-language models (VLMs) are typically pretrained with short text windows (<77 tokens), which forces the truncation of long-format captions. Yet, the distribution of…
A Large-Scale Vision-Language Dataset Derived from Open Scientific Literature to Advance Biomedical Generalist AI
Alejandro Lozano, Min Woo Sun, James Burgess +16
Despite the excitement behind biomedical artificial intelligence (AI), access to high-quality, diverse, and large-scale data - the foundation for modern AI systems - is still a bot…
BIOMEDICA: An Open Biomedical Image-Caption Archive, Dataset, and Vision-Language Models Derived from Scientific Literature
Alejandro Lozano, Min Woo Sun, James Burgess +13
The development of vision-language models (VLMs) is driven by large-scale and diverse multimodal datasets. However, progress toward generalist biomedical VLMs is limited by the lac…