4 papers
Calibrated Reasoning: An Explanatory Verifier for Dynamic and Efficient Problem-Solving
Anisha Garg, Engin Tekin, Yash More +3
Advanced test-time computing strategies are essential for scaling reasoning models, but their effectiveness is capped by the models' poor self-evaluation. We propose a pairwise Exp…
Chem42: a Family of chemical Language Models for Target-aware Ligand Generation
Aahan Singh, Engin Tekin, Maryam Nadeem +4
Revolutionizing drug discovery demands more than just understanding molecular interactions - it requires generative models that can design novel ligands tailored to specific biolog…
Prot42: a Novel Family of Protein Language Models for Target-aware Protein Binder Generation
Mohammad Amaan Sayeed, Engin Tekin, Maryam Nadeem +4
Unlocking the next generation of biotechnology and therapeutic innovation demands overcoming the inherent complexity and resource-intensity of conventional protein engineering meth…
Gene42: Long-Range Genomic Foundation Model With Dense Attention
Kirill Vishniakov, Boulbaba Ben Amor, Engin Tekin +12
We introduce Gene42, a novel family of Genomic Foundation Models (GFMs) designed to manage context lengths of up to 192,000 base pairs (bp) at a single-nucleotide resolution. Gene4…