activity
20172024
most citedMolecular representation learning with language models and domain-relevant auxiliary tasks

118 citations · 164 across the 6 of their papers we have counts for

collaborators

10 papers

cs.LG2021

Modern Hopfield Networks for Few- and Zero-Shot Reaction Template Prediction

Philipp Seidl, Philipp Renz, Natalia Dyubankova +6

Finding synthesis routes for molecules of interest is an essential step in the discovery of new drugs and materials. To find such routes, computer-assisted synthesis planning (CASP…

cs.LG20209 cited

Barking up the right tree: an approach to search over molecule synthesis DAGs

John Bradshaw, Brooks Paige, Matt J. Kusner +2

When designing new molecules with particular properties, it is not only important what to make but crucially how to make it. These instructions form a synthesis directed acyclic gr…

cs.LG2020118 cited

Molecular representation learning with language models and domain-relevant auxiliary tasks

Benedek Fabian, Thomas Edlich, Héléna Gaspar +4

We apply a Transformer architecture, specifically BERT, to learn flexible and high quality molecular representations for drug discovery problems. We study the impact of using diffe…

cs.LG202015 cited

RetroGNN: Approximating Retrosynthesis by Graph Neural Networks for De Novo Drug Design

Cheng-Hao Liu, Maksym Korablyov, Stanisław Jastrzębski +3

De novo molecule generation often results in chemically unfeasible molecules. A natural idea to mitigate this problem is to bias the search process towards more easily synthesizabl…

cs.LG20192 cited

World Programs for Model-Based Learning and Planning in Compositional State and Action Spaces

Marwin H. S. Segler

Some of the most important tasks take place in environments which lack cheap and perfect simulators, thus hampering the application of model-free reinforcement learning (RL). While…

cs.LG2019

A Model to Search for Synthesizable Molecules

John Bradshaw, Brooks Paige, Matt J. Kusner +2

Deep generative models are able to suggest new organic molecules by generating strings, trees, and graphs representing their structure. While such models allow one to generate mole…