activity
20162026
most citedReal-time coherent diffraction inversion using deep generative networks

119 citations · 392 across the 30 of their papers we have counts for

collaborators

30 papers

cond-mat.mtrl-sci2026

Materials Behavior as Mechanism Ensembles: A Probabilistic Framework for Emergent Behaviors

Brad L. Boyce, Mitchell A. Wood, Krishna Garikipati +16

Materials behavior is often treated as a deterministic mapping from structure to properties, yet many important phenomena emerge from the conditional activation of multiple mechani…

cond-mat.mtrl-sci2025

Physically Interpretable Interatomic Potentials via Symbolic Regression and Reinforcement Learning

Bilvin Varughese, Troy D. Loeffler, Suvo Banik +9

The development of next-generation molecular simulation models requires moving beyond pre-defined functional forms toward machine learning (ML) techniques that directly capture mul…

cs.CE2023★ 3 cited

Opportunities for Retrieval and Tool Augmented Large Language Models in Scientific Facilities

Michael H. Prince, Henry Chan, Aikaterini Vriza +6

Upgrades to advanced scientific user facilities such as next-generation x-ray light sources, nanoscience centers, and neutron facilities are revolutionizing our understanding of ma…

cond-mat.mtrl-sci2023★ 2 cited

Data-driven discovery of dynamics from time-resolved coherent scattering

Nina Andrejevic, Tao Zhou, Qingteng Zhang +3

Coherent X-ray scattering (CXS) techniques are capable of interrogating dynamics of nano- to mesoscale materials systems at time scales spanning several orders of magnitude. Howeve…

cond-mat.mtrl-sci2023

AI-enabled Lorentz microscopy for quantitative imaging of nanoscale magnetic spin textures

Arthur R. C. McCray, Tao Zhou, Saugat Kandel +3

The manipulation and control of nanoscale magnetic spin textures is of rising interest as they are potential foundational units in next-generation computing paradigms. Achieving th…

cs.CV2023★ 2 cited

AI-assisted Automated Workflow for Real-time X-ray Ptychography Data Analysis via Federated Resources

Anakha V Babu, Tekin Bicer, Saugat Kandel +7

We present an end-to-end automated workflow that uses large-scale remote compute resources and an embedded GPU platform at the edge to enable AI/ML-accelerated real-time analysis o…

physics.app-ph2023★ 1 cited

Demonstration of an AI-driven workflow for autonomous high-resolution scanning microscopy

Saugat Kandel, Tao Zhou, Anakha V Babu +7

With the continuing advances in scientific instrumentation, scanning microscopes are now able to image physical systems with up to sub-atomic-level spatial resolutions and sub-pico…

physics.comp-ph2022★ 4 cited

Multislice forward modeling of Coherent Surface Scattering Imaging on surface and interfacial structures

Peco Myint, Miaoqi Chu, Ashish Tripathi +6

To study nanostructures on substrates, surface-sensitive reflection-geometry scattering techniques such as grazing incident small angle x-ray scattering are commonly used to yield…

cs.LG2022★ 4 cited

Deep learning at the edge enables real-time streaming ptychographic imaging

Anakha V Babu, Tao Zhou, Saugat Kandel +15

Coherent microscopy techniques provide an unparalleled multi-scale view of materials across scientific and technological fields, from structural materials to quantum devices, from…

physics.ins-det2022★ 13 cited

A lightweight, user-configurable detector ASIC digital architecture with on-chip data compression for MHz X-ray coherent diffraction imaging

Sebastian Strempfer, Tao Zhou, Kazutomo Yoshii +6

Today, most X-ray pixel detectors used at light sources transmit raw pixel data off the detector ASIC. With the availability of more advanced ASIC technology nodes for scientific a…

cond-mat.mtrl-sci2022★ 2 cited

CEGANN: Crystal Edge Graph Attention Neural Network for multiscale classification of materials environment

Suvo Banik, Debdas Dhabal, Henry Chan +4

Machine learning models and applications in materials design and discovery typically involve the use of feature representations or "descriptors" followed by a learning algorithm th…

cond-mat.mtrl-sci2022★ 8 cited

X-ray Nano-imaging of Defects in Thin Film Catalysts via Cluster Analysis

Aileen Luo, Oleg Yu. Gorobtsov, Jocienne N. Nelson +9

Functional properties of transition-metal oxides strongly depend on crystallographic defects. In transition-metal-oxide electrocatalysts such as SrIrO3 (SIO), crystallographic latt…

eess.IV2022★ 2 cited

Real-time X-ray Phase-contrast Imaging Using SPINNet -- A Speckle-based Phase-contrast Imaging Neural Network

Zhi Qiao, Xianbo Shi, Yudong Yao +4

X-ray phase-contrast imaging has become indispensable for visualizing samples with low absorption contrast. In this regard, speckle-based techniques have shown significant advantag…

cs.DC2021★ 1 cited

High-Performance Ptychographic Reconstruction with Federated Facilities

Tekin Bicer, Xiaodong Yu, Daniel J. Ching +5

Beamlines at synchrotron light source facilities are powerful scientific instruments used to image samples and observe phenomena at high spatial and temporal resolutions. Typically…

physics.app-ph2021★ 1 cited

AutoPhaseNN: Unsupervised Physics-aware Deep Learning of 3D Nanoscale Bragg Coherent Diffraction Imaging

Yudong Yao, Henry Chan, Subramanian Sankaranarayanan +3

The problem of phase retrieval, or the algorithmic recovery of lost phase information from measured intensity alone, underlies various imaging methods from astronomy to nanoscale i…

cond-mat.mtrl-sci2021★ 13 cited

Proton distribution visualization in perovskite nickelate devices utilizing nanofocused X-rays

Ivan A. Zaluzhnyy, Peter O. Sprau, Richard Tran +17

We use a 30-nm x-ray beam to study the spatially resolved properties of a SmNiO-based nanodevice that is doped with protons. The x-ray absorption spectra supported by density-f…

cond-mat.mtrl-sci2021★ 28 cited

Learning with Delayed Rewards -- A case study on inverse defect design in 2D materials

Suvo Banik, Troy D Loeffler, Rohit Batra +3

Defect dynamics in materials are of central importance to a broad range of technologies from catalysis to energy storage systems to microelectronics. Material functionality depends…

cond-mat.mtrl-sci2020

High resolution functional imaging through Lorentz transmission electron microscopy and differentiable programming

Tao Zhou, Mathew Cherukara, Charudatta Phatak

Lorentz transmission electron microscopy is a unique characterization technique that enables the simultaneous imaging of both the microstructure and functional properties of materi…

eess.IV2020★ 53 cited

Real-time 3D Nanoscale Coherent Imaging via Physics-aware Deep Learning

Henry Chan, Youssef S. G. Nashed, Saugat Kandel +4

Phase retrieval, the problem of recovering lost phase information from measured intensity alone, is an inverse problem that is widely faced in various imaging modalities ranging fr…

eess.IV2020★ 1 cited

Real-time sparse-sampled Ptychographic imaging through deep neural networks

Mathew J. Cherukara, Tao Zhou, Youssef Nashed +4

Ptychography has rapidly grown in the fields of X-ray and electron imaging for its unprecedented ability to achieve nano or atomic scale resolution while simultaneously retrieving…

q-bio.BM2020★ 11 cited

Screening of Therapeutic Agents for COVID-19 using Machine Learning and Ensemble Docking Simulations

Rohit Batra, Henry Chan, Ganesh Kamath +3

The world has witnessed unprecedented human and economic loss from the COVID-19 disease, caused by the novel coronavirus SARS-CoV-2. Extensive research is being conducted across th…

cs.CE2020★ 2 cited

BLAST: Bridging Length/time scales via Atomistic Simulation Toolkit

Henry Chan, Badri Narayanan, Mathew Cherukara +4

The ever-increasing power of supercomputers coupled with highly scalable simulation codes have made molecular dynamics an indispensable tool in applications ranging from predictive…

physics.comp-ph2019

Active Learning the Coarse-Grained Energy Landscape For Water Clusters From Sparse Training Data

Troy D. Loeffler, Tarak K. Patra, Henry Chan +2

ANNs are currently trained by generating large quantities (On the order of or greater) of structural data in hopes that the ANN has adequately sampled the energy landscape…

physics.comp-ph2019★ 17 cited

A coarse-grained deep neural network model for liquid water

Tarak K Patra, Troy D. Loeffler, Henry Chan +3

We introduce a coarse-grained deep neural network model (CG-DNN) for liquid water that utilizes 50 rotational and translational invariant coordinates, and is trained exclusively ag…