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nnU-Net: Self-adapting Framework for U-Net-Based Medical Image Segmentation
Fabian Isensee, Jens Petersen, Andre Klein +8
The U-Net was presented in 2015. With its straight-forward and successful architecture it quickly evolved to a commonly used benchmark in medical image segmentation. The adaptation…
Tract orientation mapping for bundle-specific tractography
Jakob Wasserthal, Peter F. Neher, Klaus H. Maier-Hein
While the major white matter tracts are of great interest to numerous studies in neuroscience and medicine, their manual dissection in larger cohorts from diffusion MRI tractograms…
TractSeg - Fast and accurate white matter tract segmentation
Jakob Wasserthal, Peter Neher, Klaus H. Maier-Hein
The individual course of white matter fiber tracts is an important key for analysis of white matter characteristics in healthy and diseased brains. Uniquely, diffusion-weighted MRI…