24 citations · 24 across the 5 of their papers we have counts for
5 papers
Size and structure of the sequence space of repeat proteins
Jacopo Marchi, Ezequiel A. Galpern, Rocio Espada +3
The coding space of protein sequences is shaped by evolutionary constraints set by requirements of function and stability. We show that the coding space of a given protein family--…
Inferring repeat protein energetics from evolutionary information
Rocío Espada, R. Gonzalo Parra, Thierry Mora +2
Natural protein sequences contain a record of their history. A common constraint in a given protein family is the ability to fold to specific structures, and it has been shown poss…
Protein Repeats from First Principles
Pablo Turjanski, R. Gonzalo Parra, Rocío Espada +2
Some natural proteins display recurrent structural patterns. Despite being highly similar at the tertiary structure level, repetitions within a single repeat protein can be extreme…
Capturing coevolutionary signals in repeat proteins
Rocío Espada, R. Gonzalo Parra, Thierry Mora +2
The analysis of correlations of amino acid occurrences in globular proteins has led to the development of statistical tools that can identify native contacts -- portions of the cha…
Detecting Repetitions and Periodicities in Proteins by Tiling the Structural Space
R. Gonzalo Parra, Rocío Espada, Ignacio E. Sánchez +2
The notion of energy landscapes provides conceptual tools for understanding the complexities of protein folding and function. Energy Landscape Theory indicates that it is much easi…