10 citations · 28 across the 8 of their papers we have counts for
3 papers · 1 filter
Microtubule Tracking in Electron Microscopy Volumes
Nils Eckstein, Julia Buhmann, Matthew Cook +1
We present a method for microtubule tracking in electron microscopy volumes. Our method first identifies a sparse set of voxels that likely belong to microtubules. Similar to prior…
Estimation of Z-Thickness and XY-Anisotropy of Electron Microscopy Images using Gaussian Processes
Thanuja D. Ambegoda, Julien N. P. Martel, Jozef Adamcik +2
Serial section electron microscopy (ssEM) is a widely used technique for obtaining volumetric information of biological tissues at nanometer scale. However, accurate 3D reconstruct…
Efficient 2D neuron boundary segmentation with local topological constraints
Thanuja D. Ambegoda, Matthew Cook
We present a method for segmenting neuron membranes in 2D electron microscopy imagery. This segmentation task has been a bottleneck to reconstruction efforts of the brain's synapti…