247 citations · 261 across the 6 of their papers we have counts for
6 papers
Fluctuations in Mass-Action Equilibrium of Protein Binding Networks
Koon-Kiu Yan, Dylan Walker, Sergei Maslov
We consider two types of fluctuations in the mass-action equilibrium in protein binding networks. The first type is driven by relatively slow changes in total concentrations (copy…
Prediction and verification of indirect interactions in densely interconnected regulatory networks
Koon-Kiu Yan, Sergei Maslov, Ilya Mazo +1
We develop a matrix-based approach to predict and verify indirect interactions in gene and protein regulatory networks. It is based on the approximate transitivity of indirect regu…
Ranking Scientific Publications Using a Simple Model of Network Traffic
Dylan Walker, Huafeng Xie, Koon-Kiu Yan +1
To account for strong aging characteristics of citation networks, we modify Google's PageRank algorithm by initially distributing random surfers exponentially with age, in favor of…
Optimal ranking in networks with community structure
Huafeng Xie, Koon-Kiu Yan, Sergei Maslov
The World-Wide Web (WWW) is characterized by a strong community structure in which groups of webpages (e.g. those devoted to a common topic or belonging to the same organization) a…
Effects of Community Structure on Search and Ranking in Information Network
Huafeng Xie, Koon-Kiu Yan, Sergei Maslov
The World-Wide Web (WWW) is characterized by a strong community structure in which communities of webpages (e.g. those sharing a common keyword) are densely interconnected by hyper…
Upstream Plasticity and Downstream Robustness in Evolution of Molecular Networks
Sergei Maslov, Kim Sneppen, Kasper Astrup Eriksen
Evolving biomolecular networks have to combine the stability against perturbations with flexibility allowing their constituents to assume new roles in the cell. Gene duplication fo…