4 papers
MedAgentGym: A Scalable Agentic Training Environment for Code-Centric Reasoning in Biomedical Data Science
Ran Xu, Yuchen Zhuang, Yishan Zhong +13
We introduce MedAgentGym, a scalable and interactive training environment designed to enhance coding-based biomedical reasoning capabilities in large language model (LLM) agents. M…
MedAdapter: Efficient Test-Time Adaptation of Large Language Models towards Medical Reasoning
Wenqi Shi, Ran Xu, Yuchen Zhuang +5
Despite their improved capabilities in generation and reasoning, adapting large language models (LLMs) to the biomedical domain remains challenging due to their immense size and co…
BMRetriever: Tuning Large Language Models as Better Biomedical Text Retrievers
Ran Xu, Wenqi Shi, Yue Yu +6
Developing effective biomedical retrieval models is important for excelling at knowledge-intensive biomedical tasks but still challenging due to the deficiency of sufficient public…
EHRAgent: Code Empowers Large Language Models for Few-shot Complex Tabular Reasoning on Electronic Health Records
Wenqi Shi, Ran Xu, Yuchen Zhuang +7
Large language models (LLMs) have demonstrated exceptional capabilities in planning and tool utilization as autonomous agents, but few have been developed for medical problem-solvi…