14 citations · 21 across the 5 of their papers we have counts for
5 papers
C-A test of DNA force fields
Ivan A. Strelnikov, Natalya A. Kovaleva, Artem P. Klinov +1
The DNA duplex may be locally strongly bent in complexes with proteins, for example, with polymerases or in a nucleosome. At such bends, the DNA helix is locally in the non-canonic…
Shear induced martensitic transformations in crystalline polyethylene: direct MD simulation
Ivan A. Strelnikov, Elena A. Zubova
For the first time, we carry out molecular dynamics (MD) simulation of shear-induced martensitic phase transitions between the orthorhombic and non-orthorhombic (triclinic and mono…
The "sugar" coarse-grained DNA model
Natalia A. Kovaleva, Irina P. Kikot, Mikhail A. Mazo +1
More than twenty coarse-grained (CG) DNA models have been developed for simulating the behavior of this molecule under various conditions, including those required for nanotechnolo…
The simplest model of polymer crystal exhibiting polymorphism
Elena A. Zubova, Alexander V. Savin, Nikolay K. Balabaev
Almost all the polymer crystals have several polymorphic modifications. Their structure and existence conditions, as well as transitions between them are not understood even in the…
Can low-frequency breathers exist in a quasi-1D crystal?
A. V. Savin, E. A. Zubova, L. I. Manevitch
We investigate a quasi-1D crystal: 2D system of coupled linear chains of particles with strong intra-chain and weak inter-chain interactions. Nonlinear dynamics of one of these cha…