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math.PR2014
An Upper Bound on the Convergence Rate of a Second Functional in Optimal Sequence Alignment
Raphael Hauser, Heinrich Matzinger, Ionel Popescu
Consider finite sequences and of length , consisting of i.i.d.\ samples of random letters from a finite alphabet, and let a…
math.ST2014★ 9 cited
Optimal alignments of longest common subsequences and their path properties
Jüri Lember, Heinrich Matzinger, Anna Vollmer
We investigate the behavior of optimal alignment paths for homologous (related) and independent random sequences. An alignment between two finite sequences is optimal if it corresp…