activity
20042017
most citedDi-nucleotide Entropy as a Measure of Genomic Sequence Functionality

7 citations · 14 across the 6 of their papers we have counts for

collaborators

7 papers

q-bio.PE2017

Darwinian Genetic Drift

Alexey A. Shadrin, Dmitri V. Parkhomchuk

Genetic drift is stochastic fluctuations of alleles frequencies in a population due to sampling effects. We consider a model of drift in an equilibrium population, with high mutati…

q-bio.PE2016

Genetic recombination as DNA repair

Dmitri Parkhomchuk, Alice C. McHardy, Alexey Shadrin

Maintenance of sexual reproduction and genetic recombination imposes physiological costs when compared to parthenogenic reproduction, most prominently: for maintaining the correspo…

q-bio.PE2013★ 5 cited

Drake's Rule as a Consequence of Approaching Channel Capacity

Alexey A. Shadrin, Dmitri V. Parkhomchuk

How mutations accumulate in genomes is the central question of molecular evolution theories, however our understanding of this process is far from complete. Drake's rule is a notor…

q-bio.GN2007

Information Theory of Genomes

Dmitri V. Parkhomchuk

Relation of genome sizes to organisms complexity is still described rather equivocally. Neither the number of genes (G-value), nor the total amount of DNA (C-value) correlates cons…

q-bio.GN2006★ 2 cited

Genetic Variability of Splicing Sites

Dmitri Parkhomchuk

Splicing sites provide unique statistics in human genome due to their large number and reasonably complete annotation. Analyses of the cumulative SNPs distribution in splicing site…

q-bio.GN2006★ 7 cited

Di-nucleotide Entropy as a Measure of Genomic Sequence Functionality

Dmitri Parkhomchuk

Considering vast amounts of genomic sequences of mostly unknown functionality, in-silico prediction of functional regions is an important enterprise. Many genomic browsers employ G…