3 papers
q-bio.BM2025
ODesign: A World Model for Biomolecular Interaction Design
Odin Zhang, Xujun Zhang, Haitao Lin +34
Biomolecular interactions underpin almost all biological processes, and their rational design is central to programming new biological functions. Generative AI models have emerged…
cs.LG2025
A Mapper Algorithm with implicit intervals and its optimization
Yuyang Tao, Shufei Ge
The Mapper algorithm is an essential tool for visualizing complex, high dimensional data in topology data analysis (TDA) and has been widely used in biomedical research. It outputs…
math.AT2025
A distribution-guided Mapper algorithm
Yuyang Tao, Shufei Ge
Motivation: The Mapper algorithm is an essential tool to explore shape of data in topology data analysis. With a dataset as an input, the Mapper algorithm outputs a graph represent…