activity
19942026
most citedThe Study of Correlation Structures of DNA Sequences: A Critical Review

233 citations · 1.6k across the 45 of their papers we have counts for

collaborators
Showing physics.bio-phShow all

6 papers · 1 filter

physics.bio-ph2002★ 53 cited

Isochores Merit the Prefix 'Iso'

Wentian Li, Pedro Bernaola-Galvan, Pedro Carpena +1

The isochore concept in human genome sequence was challenged in an analysis by the International Human Genome Sequencing Consortium (IHGSC). We argue here that a statement in IGHSC…

physics.bio-ph2002★ 20 cited

Simplifying the mosaic description of DNA sequences

Rajeev K. Azad, J. Subba Rao, Wentian Li +1

By using the Jensen-Shannon divergence, genomic DNA can be divided into compositionally distinct domains through a standard recursive segmentation procedure. Each domain, while sig…

physics.bio-ph2001★ 10 cited

How Many Genes Are Needed for a Discriminant Microarray Data Analysis ?

Wentian Li, Yaning Yang

The analysis of the leukemia data from Whitehead/MIT group is a discriminant analysis (also called a supervised learning). Among thousands of genes whose expression levels are meas…

physics.bio-ph2001★ 79 cited

Zipf's Law in Importance of Genes for Cancer Classification Using Microarray Data

Wentian Li

Microarray data consists of mRNA expression levels of thousands of genes under certain conditions. A difference in the expression level of a gene at two different conditions/phenot…

physics.bio-ph2001

DNA Segmentation as A Model Selection Process

Wentian Li

Previous divide-and-conquer segmentation analyses of DNA sequences do not provide a satisfactory stopping criterion for the recursion. This paper proposes that segmentation be cons…

physics.bio-ph2001★ 67 cited

New stopping criteria for segmenting DNA sequences

Wentian Li

We propose a solution on the stopping criterion in segmenting inhomogeneous DNA sequences with complex statistical patterns. This new stopping criterion is based on Bayesian Inform…