4 citations · 4 across the 5 of their papers we have counts for
5 papers
From FAIR to CURE: Guidelines for Computational Models of Biological Systems
Herbert M. Sauro, Eran Agmon, Michael L. Blinov +48
Guidelines for managing scientific data have been established under the FAIR principles requiring that data be Findable, Accessible, Interoperable, and Reusable. In many scientific…
BioSimulators: a central registry of simulation engines and services for recommending specific tools
Bilal Shaikh, Lucian P. Smith, Dan Vasilescu +68
Computational models have great potential to accelerate bioscience, bioengineering, and medicine. However, it remains challenging to reproduce and reuse simulations, in part, becau…
SED-ML Validator: tool for debugging simulation experiments
Bilal Shaikh, Andrew Philip Freiburger, Matthias König +7
Summary: More sophisticated models are needed to address problems in bioscience, synthetic biology, and precision medicine. To help facilitate the collaboration needed for such mod…
Practical Resources for Enhancing the Reproducibility of Mechanistic Modeling in Systems Biology
Michael L. Blinov, John H. Gennari, Jonathan R. Karr +3
Although reproducibility is a core tenet of the scientific method, it remains challenging to reproduce many results. Surprisingly, this also holds true for computational results in…
Combinatorial complexity and dynamical restriction of network flows in signal transduction
James R. Faeder, Michael L. Blinov, Byron Goldstein +1
The activities and interactions of proteins that govern the cellular response to a signal generate a multitude of protein phosphorylation states and heterogeneous protein complexes…