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Median and Small Parsimony Problems on RNA trees
Bertrand Marchand, Yoann Anselmetti, Manuel Lafond +1
Motivation: Non-coding RNAs (ncRNAs) express their functions by adopting molecular structures. Specifically, RNA secondary structures serve as a relatively stable intermediate step…
Finding agreement cherry-reduced subnetworks in level-1 networks
Kaari Landry, Olivier Tremblay-Savard, Manuel Lafond
Phylogenetic networks are increasingly being considered as better suited to represent the complexity of the evolutionary relationships between species. One class of phylogenetic ne…
Whom to befriend to influence people
Gennaro Cordasco, Luisa Gargano, Manuel Lafond +4
Alice wants to join a new social network, and influence its members to adopt a new product or idea. Each person in the network has a certain threshold for {\em activatio…
Gene Tree Construction and Correction using SuperTree and Reconciliation
Manuel Lafond, Cédric Chauve, Nadia El-Mabrouk +1
The supertree problem asking for a tree displaying a set of consistent input trees has been largely considered for the reconstruction of species trees. Here, we rather explore this…