4 citations · 6 across the 4 of their papers we have counts for
4 papers
M5: A Whole Genome Bacterial Encoder at Single Nucleotide Resolution
Agust Egilsson
A linear attention mechanism is described to extend the context length of an encoder only transformer, called M5 in this report, to a multi-million single nucleotide resolution fou…
Vertex coloring acyclic digraphs and their corresponding hypergraphs
Geir Agnarsson, Agust Egilsson, Magnus Mar Halldorsson
We consider vertex coloring of an acyclic digraph $\Gdag$ in such a way that two vertices which have a common ancestor in $\Gdag$ receive distinct colors. Such colorings arise in a…
Newton polyhedra and Poisson structures from certain linear Hamiltonian circle actions
Agust S. Egilsson
In this paper we first describe the geometry of the Newton polyhedra of polynomials invariant under certain linear Hamiltonian circle actions. From the geometry of the polyhedra, v…
Indexing of Tables Referencing Complex Structures
Agust S. Egilsson, Hakon Gudbjartsson
We introduce indexing of tables referencing complex structures such as digraphs and spatial objects, appearing in genetics and other data intensive analysis. The indexing is achiev…