3 papers
cs.CV2025
ChestGPT: Integrating Large Language Models and Vision Transformers for Disease Detection and Localization in Chest X-Rays
Shehroz S. Khan, Petar Przulj, Ahmed Ashraf +1
The global demand for radiologists is increasing rapidly due to a growing reliance on medical imaging services, while the supply of radiologists is not keeping pace. Advances in co…
q-bio.GN2025
Artificial Intelligence and Deep Learning Algorithms for Epigenetic Sequence Analysis: A Review for Epigeneticists and AI Experts
Muhammad Tahir, Mahboobeh Norouzi, Shehroz S. Khan +3
Epigenetics encompasses mechanisms that can alter the expression of genes without changing the underlying genetic sequence. The epigenetic regulation of gene expression is initiate…
cs.LG2025
LOCO-EPI: Leave-one-chromosome-out (LOCO) as a benchmarking paradigm for deep learning based prediction of enhancer-promoter interactions
Muhammad Tahir, Shehroz S. Khan, James Davie +2
In mammalian and vertebrate genomes, the promoter regions of the gene and their distal enhancers may be located millions of base-pairs from each other, while a promoter may not int…