155 citations · 157 across the 3 of their papers we have counts for
3 papers
q-bio.GN2020★ 155 cited
Technology dictates algorithms: Recent developments in read alignment
Mohammed Alser, Jeremy Rotman, Kodi Taraszka +13
Massively parallel sequencing techniques have revolutionized biological and medical sciences by providing unprecedented insight into the genomes of humans, animals, and microbes. M…
q-bio.QM2019
Metagenomics for clinical diagnostics: technologies and informatics
Caitlin Loeffler, Keylie M. Gibson, Lana Martin +9
The human-associated microbiome is closely tied to human health and is of substantial clinical interest. Metagenomics-based tools are emerging for clinical diagnostics, tracking th…
q-bio.GN2016★ 2 cited
MetaPalette: A -mer painting approach for metagenomic taxonomic profiling and quantification of novel strain variation
David Koslicki, Daniel Falush
Metagenomic profiling is challenging in part because of the highly uneven sampling of the tree of life by genome sequencing projects and the limitations imposed by performing phylo…