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researcher

K. Břinda

7 papers hereh-index 122.2k citations28 works total

Matching runs newest-first, so older work may not be attached to this profile yet.

author position
  • sole author1
  • first author4
  • middle author2

Across the 7 of 7 papers where every author was matched, so the position is known.

fields
  • q-bio.GN3
  • math.CO2
  • cs.DM1
  • cs.HC1

identity via Semantic Scholar / OpenAlex

activity
20112017
most citedSpaced seeds improve k-mer-based metagenomic classification

112 citations · 167 across the 6 of their papers we have counts for

collaborators
Showing 2015Show all

2 papers · 1 filter

q-bio.GN2015★ 11 cited

RNF: a general framework to evaluate NGS read mappers

Karel Břinda, Valentina Boeva, Gregory Kucherov

Aligning reads to a reference sequence is a fundamental step in numerous bioinformatics pipelines. As a consequence, the sensitivity and precision of the mapping tool, applied with…

q-bio.GN2015★ 112 cited

Spaced seeds improve k-mer-based metagenomic classification

Karel Brinda, Maciej Sykulski, Gregory Kucherov

Metagenomics is a powerful approach to study genetic content of environmental samples that has been strongly promoted by NGS technologies. To cope with massive data involved in mod…

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Not affiliated with arXiv. Researcher data from Semantic Scholar (ODC-BY) and OpenAlex.