533 citations · 647 across the 6 of their papers we have counts for
3 papers · 1 filter
Bipartite Community Structure of eQTLs
John Platig, Peter Castaldi, Dawn DeMeo +1
Genome Wide Association Studies (GWAS) and eQTL analyses have produced a large and growing number of genetic associations linked to a wide range of human phenotypes. As of 2013, th…
High Performance Computing of Gene Regulatory Networks using a Message-Passing Model
Kimberly Glass, John Quackenbush, Jeremy Kepner
Gene regulatory network reconstruction is a fundamental problem in computational biology. We recently developed an algorithm, called PANDA (Passing Attributes Between Networks for…
Estimating sample-specific regulatory networks
Marieke Lydia Kuijjer, Matthew Tung, GuoCheng Yuan +2
Biological systems are driven by intricate interactions among the complex array of molecules that comprise the cell. Many methods have been developed to reconstruct network models…