23 citations · 110 across the 24 of their papers we have counts for
4 papers · 1 filter
SEGMENT3D: A Web-based Application for Collaborative Segmentation of 3D images used in the Shoot Apical Meristem
Thiago V. Spina, Johannes Stegmaier, Alexandre X. Falcão +2
The quantitative analysis of 3D confocal microscopy images of the shoot apical meristem helps understanding the growth process of some plants. Cell segmentation in these images is…
Cell Segmentation in 3D Confocal Images using Supervoxel Merge-Forests with CNN-based Hypothesis Selection
Johannes Stegmaier, Thiago V. Spina, Alexandre X. Falcão +4
Automated segmentation approaches are crucial to quantitatively analyze large-scale 3D microscopy images. Particularly in deep tissue regions, automatic methods still fail to provi…
The MATLAB Toolbox SciXMiner: User's Manual and Programmer's Guide
Ralf Mikut, Andreas Bartschat, Wolfgang Doneit +5
The Matlab toolbox SciXMiner is designed for the visualization and analysis of time series and features with a special focus to classification problems. It was developed at the Ins…
3D Cell Nuclei Segmentation with Balanced Graph Partitioning
Julian Arz, Peter Sanders, Johannes Stegmaier +1
Cell nuclei segmentation is one of the most important tasks in the analysis of biomedical images. With ever-growing sizes and amounts of three-dimensional images to be processed, t…