12 citations · 20 across the 5 of their papers we have counts for
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q-bio.GN2016★ 2 cited
A frame-based representation of genomic sequences for removing errors and rare variant detection in NGS data
Raunaq Malhotra, Manjari Mukhopadhyay, Mary Poss +1
We propose a frame-based representation of k-mers for detecting sequencing errors and rare variants in next generation sequencing data obtained from populations of closely related…
q-bio.GN2016★ 1 cited
Separating Putative Pathogens from Background Contamination with Principal Orthogonal Decomposition: Evidence for Leptospira in the Ugandan Neonatal Septisome
Steven J. Schiff, Julius Kiwanuka, Gina Riggio +14
Neonatal sepsis (NS) is responsible for over a 1 million yearly deaths worldwide. In the developing world NS is often treated without an identified microbial pathogen. Amplicon seq…